CDS

Accession Number TCMCG015C16288
gbkey CDS
Protein Id XP_027113702.1
Location join(25274152..25274289,25278211..25278311,25278414..25278774,25279430..25280092,25280186..25280266,25280366..25280423,25280629..25280690,25280769..25280875,25280970..25281057,25281657..25281968)
Gene LOC113732231
GeneID 113732231
Organism Coffea arabica

Protein

Length 656aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA506972
db_source XM_027257901.1
Definition nucleolin 1-like isoform X2 [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category A
Description RNA binding (RRM RBD RNP motifs) family protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000165        [VIEW IN EMBL-EBI]
GO:0002237        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003727        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006468        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0008143        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009617        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009894        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016234        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0023014        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031329        [VIEW IN EMBL-EBI]
GO:0031440        [VIEW IN EMBL-EBI]
GO:0031441        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032496        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0035556        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042405        [VIEW IN EMBL-EBI]
GO:0043085        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043487        [VIEW IN EMBL-EBI]
GO:0043488        [VIEW IN EMBL-EBI]
GO:0043621        [VIEW IN EMBL-EBI]
GO:0044093        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0048471        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050684        [VIEW IN EMBL-EBI]
GO:0050686        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050790        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051338        [VIEW IN EMBL-EBI]
GO:0051347        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061013        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070063        [VIEW IN EMBL-EBI]
GO:0070717        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071216        [VIEW IN EMBL-EBI]
GO:0071219        [VIEW IN EMBL-EBI]
GO:0071222        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071396        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1900363        [VIEW IN EMBL-EBI]
GO:1900364        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]
GO:1903311        [VIEW IN EMBL-EBI]
GO:1903312        [VIEW IN EMBL-EBI]
GO:1904245        [VIEW IN EMBL-EBI]
GO:1904247        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGACGGAGCGATTGGGAACGGCGATGATCGAACTTTTAACGTTAATTTCGGCAGCGAAGGAGTATCGAAGTTGCGAGAGGATCTTAAAGAGAAGCTCAAGGAATATATGGGGGAGTACACTGATGATACTCTTGTGGAATACATTATAGTCTTGCTGAAAAATGGAAGGCGCAAAGATGAAGCAAGGAATGAGTTGAATGTTTTCCTAGATGATGCTAGCGATTCATTTGTTTCTTGGCTGTGGGATCACCTGGCATCAAACTTAGATCTCTATGCACAAACGCATCAATCTCATTCAGATGGGGCACTGAAGACAAGTCCAATTGCAATTCAGCAGGCTGGTGGAAATGATTCTCGTCTGGTAGAGTCTAAATCTGTAAATTTAAAGTCCAATAAATCCTTTAAGGCCCGCCATACTAGGGAGTGGAAAGGGCAAGCCATAGATGAAGGGGAACAACCCCGTTTAAGAAGTTCTGTGGCTGATGACAATCATGCTGATAAGGATAGTCGTAAGGCTGGCAATGAAAAAATAGAGGTCTCTCCTCAGCCAGCCACACGTAGAAAAAGAAATCGTCCTGAGGAGCAGCTGCAATCAAAGAGGGAGGTAGTTTCTCAAGCACCAATTGCGGCACCACGAAGATTGCTGCAATTTGCAGTACGGGATGCAGTTGCCACTTCAAGGCCGTCAACTATAACTGCTGAACCTTCATTAAAGCGGCTTCGTTCTGTGGTGTCCACTACTGCAGAGGACTCTAATCTAGAAGAACATCCACAGAAAATTCGATCAGTTGCTAGAGTACCGAATGCCATGGCAACAGCTATTAAAGCTATAGCAGAAGCGGCAAAAGATGTTCGGAGAGTTAGATCATCAGGTAACGTGTTTGATAGGCTTGGTCGTCCTAAGGATGTTTCAGAAACCTTGAATCAATCAGAAGAATTTGGAGAAGATCCTGCTGGGGAAGGACAAGATGGAGCTTATATTAAGGAGGAAGGGAGGCCAACATATGATCATACAAATGATTATAGTCGGCCTTACCCGAATGATGTGTCTCTTTTGCAAAGGGACACAAGGATGGTAATTGATCCTGCATCTGATAATGAAGATTATGATACAACCATGGATGAACCTCAGACTGGAAATGGTATTGGGATCTCAAGAATGGTCCCGCATAGTGCGGCTAACAATGCTGATGAAATAGTCATTGTACCATCGAAGAATCAGGATCAGTTTGGGAAGATTTCTGATACTTCTCATAAGATAGTGAATGAAGCATTAACTTCTGTGCCTGCTGGGAGGCTGACGAAGGAGAACAATAATTCTGTTGCAGTTGCGAATGGAAATGCACAACTAGAAGTGGATGCTCCGAAAGAATCTCAAAAGACACATTCATCTGCTCTTGGGTCATATCCCATTGGTCGACCAACAGAAGATTCAGACTCCCGTACGATATTTGTTAACAATGTTCATTTTGCTGCCACCAAGGATAGCCTTTCTCGACACTTTAACAAATTTGGGGAAGTACTAAAAGTCATCATCTTAACTGATGCAGCAACAGGGCAACCAAAAGGGTCAGCTTATATTGAGTTCATGAGAAAGGAGGCTGCAGAAAATGCTTTATCTCTCGACGGCACGTCATTTATGTCAAGGATTCTTCGGGTCGTACGAAAAAATTCTGCTCAGCAGGAAGCTTTTCCTATCCCAACTTGGCCTCGTATTGCCCGTGGATCCCCGTATGCTGTTTCTAGATTTGGCAGGGCTCCTTTCTCAAGAGGCATTGGGGGTGCATACCGATCCCGCCTCCTAACTAAACCTGGTCCAAGGAGTTTCCAGTGGAAGCGGGAAACTCAGCCCACTCAGACGGAGATACTCAATCCAGGATCTAGTAACACTGCTCCATCTTCCATTTCTCGGAGTCTCACATATGTTAGACCTGAGCCTAAGACGAATGAAAGTTCGAGTGCGGCTTAG
Protein:  
MDGAIGNGDDRTFNVNFGSEGVSKLREDLKEKLKEYMGEYTDDTLVEYIIVLLKNGRRKDEARNELNVFLDDASDSFVSWLWDHLASNLDLYAQTHQSHSDGALKTSPIAIQQAGGNDSRLVESKSVNLKSNKSFKARHTREWKGQAIDEGEQPRLRSSVADDNHADKDSRKAGNEKIEVSPQPATRRKRNRPEEQLQSKREVVSQAPIAAPRRLLQFAVRDAVATSRPSTITAEPSLKRLRSVVSTTAEDSNLEEHPQKIRSVARVPNAMATAIKAIAEAAKDVRRVRSSGNVFDRLGRPKDVSETLNQSEEFGEDPAGEGQDGAYIKEEGRPTYDHTNDYSRPYPNDVSLLQRDTRMVIDPASDNEDYDTTMDEPQTGNGIGISRMVPHSAANNADEIVIVPSKNQDQFGKISDTSHKIVNEALTSVPAGRLTKENNNSVAVANGNAQLEVDAPKESQKTHSSALGSYPIGRPTEDSDSRTIFVNNVHFAATKDSLSRHFNKFGEVLKVIILTDAATGQPKGSAYIEFMRKEAAENALSLDGTSFMSRILRVVRKNSAQQEAFPIPTWPRIARGSPYAVSRFGRAPFSRGIGGAYRSRLLTKPGPRSFQWKRETQPTQTEILNPGSSNTAPSSISRSLTYVRPEPKTNESSSAA